USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: TPD54_HUMAN USC-OGP 2-DE database:  TPD54_HUMAN TPD54_HUMAN General information about the entry View entry in simple text format Entry name TPD54_HUMAN Primary accession number O43399 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Tumor protein D54; Short=hD54; AltName: Full=Tumor protein D52-like 2;. Gene name Name=TPD52L2 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0496: pI=5.02; Mw=29057 PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0778: pI=5.03; Mw=30102 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1259: pI=5.08; Mw=30030 SPOT OGP-1260: pI=5.04; Mw=29946 Cross-references UniProtKB/Swiss-Prot O43399; TPD54_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TPD54_HUMAN Primary accession number O43399 Secondary accession number(s) B4DPJ6 E1P5G7 O43398 Q5JWU5 Q5JWU6 Q5JWU8 Q5U0E0 Q9H3Z6 Sequence was last modified on  January 23, 2002 (version 2) Annotations were last modified on  March 15, 2017 (version 157) Name and origin of the protein Description RecName: Full=Tumor protein D54; Short=hD54; AltName: Full=Tumor protein D52-like 2; Gene name Name=TPD52L2 Encoded on Name=TPD52L2 Keywords Acetylation; Alternative splicing; Coiled coil; Complete proteome; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF004429; AAC98477.1; -; mRNA EMBL AF004430; AAC98478.1; -; mRNA EMBL AK055068; BAG51460.1; -; mRNA EMBL AK298366; BAG60608.1; -; mRNA EMBL BT019631; AAV38437.1; -; mRNA EMBL AL118506; CAC15492.1; -; Genomic_DNA EMBL AL118506; CAI21899.1; -; Genomic_DNA EMBL AL118506; CAI21900.1; -; Genomic_DNA EMBL AL118506; CAI21902.1; -; Genomic_DNA EMBL CH471077; EAW75195.1; -; Genomic_DNA EMBL CH471077; EAW75197.1; -; Genomic_DNA EMBL CH471077; EAW75198.1; -; Genomic_DNA EMBL CH471077; EAW75199.1; -; Genomic_DNA EMBL CH471077; EAW75201.1; -; Genomic_DNA EMBL BC006804; AAH06804.1; -; mRNA EMBL BU165202; -; NOT_ANNOTATED_CDS; mRNA CCDS CCDS13540.1; -. [O43399-1]; . CCDS CCDS13541.1; -. [O43399-2]; . CCDS CCDS13542.1; -. [O43399-7]; . CCDS CCDS13543.1; -. [O43399-3]; . CCDS CCDS13544.1; -. [O43399-5]; . CCDS CCDS13545.1; -. [O43399-4]; . CCDS CCDS58785.1; -. [O43399-6]; . RefSeq NP_001230821.1; NM_001243892.1. [O43399-6]; . RefSeq NP_003279.2; NM_003288.3. [O43399-1]; . RefSeq NP_955392.1; NM_199360.2. [O43399-7]; . RefSeq NP_955393.1; NM_199361.2. [O43399-3]; . RefSeq NP_955394.1; NM_199362.2. [O43399-5]; . RefSeq NP_955395.1; NM_199363.2. [O43399-4]; . UniGene Hs.473296; -; . ProteinModelPortal O43399; -; . SMR O43399; -; . BioGrid 113018; 67; . IntAct O43399; 10; . iPTMnet O43399; -; . PhosphoSitePlus O43399; -; . SwissPalm O43399; -; . BioMuta TPD52L2; -; . OGP O43399; -; . EPD O43399; -; . PeptideAtlas O43399; -; . PRIDE O43399; -; . TopDownProteomics O43399-5; -. [O43399-5]; . DNASU 7165; -; . Ensembl ENST00000217121; ENSP00000217121; ENSG00000101150. [O43399-7]; . Ensembl ENST00000346249; ENSP00000343547; ENSG00000101150. [O43399-1]; . Ensembl ENST00000348257; ENSP00000343554; ENSG00000101150. [O43399-2]; . Ensembl ENST00000351424; ENSP00000340006; ENSG00000101150. [O43399-3]; . Ensembl ENST00000352482; ENSP00000344647; ENSG00000101150. [O43399-5]; . Ensembl ENST00000358548; ENSP00000351350; ENSG00000101150. [O43399-4]; . Ensembl ENST00000369927; ENSP00000358943; ENSG00000101150. [O43399-6]; . GeneID 7165; -; . KEGG hsa:7165; -; . UCSC uc002ygy.4; human. [O43399-1]; . CTD 7165; -; . DisGeNET 7165; -; . GeneCards TPD52L2; -; . HGNC HGNC:12007; TPD52L2; . HPA HPA047489; -; . MIM 603747; gene; . neXtProt NX_O43399; -; . OpenTargets ENSG00000101150; -; . PharmGKB PA36688; -; . GeneTree ENSGT00390000015988; -; . HOGENOM HOG000231968; -; . HOVERGEN HBG058643; -; . InParanoid O43399; -; . OMA RARPFSH; -; . OrthoDB EOG091G0MLN; -; . PhylomeDB O43399; -; . TreeFam TF317562; -; . SignaLink O43399; -; . ChiTaRS TPD52L2; human; . GeneWiki TPD52L2; -; . GenomeRNAi 7165; -; . PRO PR:O43399; -; . Proteomes UP000005640; Chromosome 20; . Bgee ENSG00000101150; -; . CleanEx HS_TPD52L2; -; . ExpressionAtlas O43399; baseline and differential; . Genevisible O43399; HS; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB; . GO GO:0046982; F:protein heterodimerization activity; IDA:UniProtKB; . GO GO:0042803; F:protein homodimerization activity; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0042127; P:regulation of cell proliferation; TAS:UniProtKB; . InterPro IPR007327; TPD52; . PANTHER PTHR19307; PTHR19307; 1; . Pfam PF04201; TPD52; 2; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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